BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002D12LP1|AL424966
(1039 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig424 1916 0.0
>3x_Contig424
Length = 1467
Score = 1916 bits (964), Expect = 0.0
Identities = 977/982 (99%), Gaps = 1/982 (0%)
Strand = Plus / Minus
Query: 1 gatcagttatattccagaaccaatgggttaagtgagaacataatttgatatataattcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 gatcagttatattccagaaccaatgggttaagtgagaacataatttgatatataattcaa 923
Query: 61 cttacaattydtttgtatgcggatttgagaagaatcctattggggctctccaagcaaatt 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 cttacaattctgttgtatgcggatttgagaagaatcctattggggctctccaagcaaatt 863
Query: 121 atcgatcatgagccattttcagtgacatcagaaagcttgaagttaacctgttaataccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 atcgatcatgagccattttcagtgacatcagaaagcttgaagttaacctgttaataccac 803
Query: 181 gcttaaaagtctcaaacagacatccaatatgttgttataagctgcgcgagtggtgtgcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gcttaaaagtctcaaacagacatccaatatgttgttataagctgcgcgagtggtgtgcac 743
Query: 241 tctgtttttctatacatcgattttcttttgaaatacgtaaaatttaaagcataaaacaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tctgtttttctatacatcgattttcttttgaaatacgtaaaatttaaagcataaaacaat 683
Query: 301 aatatttgcccatatcaaaccatctactctaaacagctagattttgtgtgaataaggaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 aatatttgcccatatcaaaccatctactctaaacagctagattttgtgtgaataaggaaa 623
Query: 361 taatgtctagtacccagacagaagccataagtgattcacccatatgaacaaagtgttaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 taatgtctagtacccagacagaagccataagtgattcacccatatgaacaaagtgttaac 563
Query: 421 acacggaaatgacatggaaaatgttttcgtaaatgtatctacacttatcaccaaagttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 acacggaaatgacatggaaaatgttttcgtaaatgtatctacacttatcaccaaagttct 503
Query: 481 gttaacggctcaatcgcacattaacattgatgaataggtatacgttcgtacttgaggttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gttaacggctcaatcgcacattaacattgatgaataggtatacgttcgtacttgaggttt 443
Query: 541 cacagtaaaaatcatagtccatataacggaacaaattagacttcgtctgactatcagcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cacagtaaaaatcatagtccatataacggaacaaattagacttcgtctgactatcagcca 383
Query: 601 aaccctgtaaaaacacccactagtacattgttatgcatgtcctttcgctgttgctgtgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aaccctgtaaaaacacccactagtacattgttatgcatgtcctttcgctgttgctgtgaa 323
Query: 661 taacacgtgactcaaaaatcgatatcctgcatcactattggractttaactccagttcac 720
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 322 taacacgtgactcaaaaatcgatatcctgcatcactattggaactttaactccagttcac 263
Query: 721 caggttatggtagccaggttcagaagaaggctaggaagttctttgtgtgg-cacaagtga 779
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 262 caggttatggtagccaggttcagaagaaggctaggaagttctttgtgtggccacaagtga 203
Query: 780 tagaatctggagatatagagaaattgtcgtgtcttttcctatctttcagtaaagacattg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tagaatctggagatatagagaaattgtcgtgtcttttcctatctttcagtaaagacattg 143
Query: 840 atatttcaaatcaacaaactattcctaagtcattgacgggtgaaaaaaagtcgtagagga 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 atatttcaaatcaacaaactattcctaagtcattgacgggtgaaaaaaagtcgtagagga 83
Query: 900 aaaacgatcgagctctgacattgttttctcactgtatttgatgaattataacgtgatatt 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 aaaacgatcgagctctgacattgttttctcactgtatttgatgaattataacgtgatatt 23
Query: 960 atcttaagtgtattggtcgcat 981
||||||||||||||||||||||
Sbjct: 22 atcttaagtgtattggtcgcat 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7574
Number of Sequences: 1807
Number of extensions: 7574
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 1039
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1023
effective length of database: 10,329,639
effective search space: 10567220697
effective search space used: 10567220697
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)